Usage
runcrate
runcrate [OPTIONS] COMMAND [ARGS]...
convert
Convert a CWLProv RO bundle into a Workflow Run RO-Crate.
RO_DIR: top-level directory of the CWLProv RO
runcrate convert [OPTIONS] RO_DIR
Options
- -o, --output <output>
output RO-Crate directory or zip file
- -l, --license <license>
license URL (or WorkflowHub-accepted id)
- -w, --workflow-name <STRING>
original workflow name
- --readme <readme>
path to a README file (should be README.md in Markdown format)
Arguments
- RO_DIR
Required argument
report
Read a Workflow Run RO-Crate and report on the actions it describes.
RO_CRATE: RO-Crate directory or zip file.
runcrate report [OPTIONS] RO_CRATE
Arguments
- RO_CRATE
Required argument
run
Run the workflow from a Workflow Run RO-Crate.
RO_CRATE: RO-Crate directory or zip file.
runcrate run [OPTIONS] RO_CRATE
Options
- --executable <executable>
workflow runner executable
- --keep-wd
keep working directory
- --dry-run
do not actually run the workflow (implies –keep-wd)
Arguments
- RO_CRATE
Required argument
version
Print version string and exit.
runcrate version [OPTIONS]